Description

These functions are provided for compatibility with older versions of vegan only, and may be defunct as soon as the next release.

Usage

Arguments

Details

Function as.mlm refits results of constrained ordination (cca, rda, capscale) as a multiple response linear model (lm). This allows finding influence statistics (influence.measures). It is also possible to derive several other statistics, but most of these are biased and misleading, since refitting ignores a major component of variation in constrained ordination. This function is replaced with a set functions that can find the same statistics directly from the ordination result object: see hatvalues.cca, rstandard.cca, rstudent.cca, cooks.distance.cca, vcov.cca.

Function humpfit was moved to the natto package and is still available from https://github.com/jarioksa/natto. The function fits a neutral no-interaction model for the biomass – species-richness relation. The old help page is still available with help("humpfit-deprecated") (note the quotes).

See Also

Deprecated