AnnotationForge

Create an SQLite-based annotation package

available.db0pkgs

Generates the seqnames.db package and database

Read a data file describing the probe sequences on an Affymetrix genechip

Read a 1lq file for an Affymetrix genechip

Making a chip package from annotations available from data.frame of probes mapped to gene IDs and an existing org package.

Builds an individual DB from online files at inparanoid that is in turn meant for generating Inparanoid 8 based objects.

Making an organism package from annotations available from a set of named data.frames.

Make an organism package from annotations available from NCBI.

Make a package with probe sequence related data for microarrays

Creates a sqlite database, and then makes an annotation package with it

Populates an SQLite DB with and produces a schema definition

Wrap up all the Base Databases into Packages for distribution