MALDIquant

Class "AbstractMassObject"

Removed Functions/Methods in Package MALDIquant

Deprecated Functions/Methods in Package MALDIquant

Quantitative Analysis of Mass Spectrometry Data

Parallel Support in Package MALDIquant

Class "MassPeaks"

Class "MassSpectrum"

Align MassSpectrum objects.

Averages MassSpectrum objects.

Align Peaks into discrete bins.

Calibrates intensities of a MassSpectrum object.

Creates a MassPeaks object.

Creates a MassSpectrum object.

Detects peaks in a MassSpectrum object.

Determine warping functions of MassPeaks objects.

Estimates the baseline of a MassSpectrum object.

Estimates the noise of a MassSpectrum object.

Example Mass Spectra (raw)

Removes less frequent peaks.

Finds or removes empty AbstractMassObject objects in a list.

Converts a list of MassPeaks objects into a matrix.

Tests for MassSpectrum or MassPeaks object.

Tests a list of MassSpectrum or MassPeaks objects.

Draws peak labels to plot.

Relaxed Value Matching

Merges MassPeaks objects.

Finds monoisotopic peaks in a MassPeaks object.

Turn a list of AbstractMassObjects into a mass spectrometry imaging slice.

Plots an AbstractMassObject object.

Plots a Mass Spectrometry Imaging dataset.

Creates a reference MassPeaks object.

Removes the baseline of a MassSpectrum object.

Smoothes intensities of a MassSpectrum object.

Transforms intensities of an AbstractMassObject object.

Trim an AbstractMassObject object.

Run warping functions on AbstractMassObject objects.